PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_33244_iso_2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family C2H2
Protein Properties Length: 88aa    MW: 9658.34 Da    PI: 8.0603
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_33244_iso_2genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.0008220523
                                         TTTEEESSHHHHHHHHHHT CS
                              zf-C2H2  5 dCgksFsrksnLkrHirtH 23
                                         dCg+ Fsr++++ +H   +
  cra_locus_33244_iso_2_len_262_ver_3  2 DCGTLFSRRDSFITHRAFC 20
                                         8**************8765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
XDCGTLFSRR DSFITHRAFC DALAEESART ISGNPLLSSQ SAIAMAPSSS SSSASQFIFS  60
MKKEQQTFNL RPEIPPWLAC PNRNPNPX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006342975.11e-27PREDICTED: protein indeterminate-domain 7-like
RefseqXP_006342976.11e-27PREDICTED: protein indeterminate-domain 7-like
RefseqXP_009774627.11e-27PREDICTED: zinc finger protein NUTCRACKER-like
RefseqXP_009774629.11e-27PREDICTED: zinc finger protein NUTCRACKER-like
RefseqXP_011072643.18e-28PREDICTED: zinc finger protein NUTCRACKER-like, partial
RefseqXP_015070300.11e-27PREDICTED: protein indeterminate-domain 7-like
RefseqXP_015070301.11e-27PREDICTED: protein indeterminate-domain 7-like
RefseqXP_016433584.11e-27PREDICTED: protein indeterminate-domain 7-like
RefseqXP_016433590.11e-27PREDICTED: protein indeterminate-domain 7-like
SwissprotQ8H1F55e-16IDD7_ARATH; Protein indeterminate-domain 7
TrEMBLA0A068TNU13e-30A0A068TNU1_COFCA; Uncharacterized protein
STRINGPGSC0003DMT4000063853e-27(Solanum tuberosum)